BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB038A12SP1|AL430480
(955 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1663 1880 0.0
3x_Contig1557 155 2e-37
3x_Contig1518 153 7e-37
3x_Contig1428 151 3e-36
3x_Contig1446 149 1e-35
3x_Contig1374 149 1e-35
3x_Contig1521 145 2e-34
3x_Contig1741 113 6e-25
3x_Contig1272 111 2e-24
>3x_Contig1663
Length = 13533
Score = 1880 bits (947), Expect = 0.0
Identities = 949/951 (99%)
Strand = Plus / Plus
Query: 1 ccatgacaaaaaaacccacgcactttccatacacagacttttgataaacatttcataagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 ccatgacaaaaaaacccacgcactttccatacacagacttttgataaacatttcataagt 700
Query: 61 ctttttatggagaataaaaggagtwattgctaaacagttgaatcatgtgctccacataga 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 701 ctttttatggagaataaaaggagtaattgctaaacagttgaatcatgtgctccacataga 760
Query: 121 attcaatccaaaccgatgatacagttcagtattacattagtatgaccatgtcacgggaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 attcaatccaaaccgatgatacagttcagtattacattagtatgaccatgtcacgggaac 820
Query: 181 ataaagtttgawaaaacaactttttcatcaatatcatccgatatagtgtaacggctatca 240
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 ataaagtttgaaaaaacaactttttcatcaatatcatccgatatagtgtaacggctatca 880
Query: 241 catcacgctttcaccgtggagaccggggttcgactccccgtatcggagtattattttttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 881 catcacgctttcaccgtggagaccggggttcgactccccgtatcggagtattattttttg 940
Query: 301 tattttcttattacccagtggaaagttaatgttcgactgtgaatataattgcaattcgac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 941 tattttcttattacccagtggaaagttaatgttcgactgtgaatataattgcaattcgac 1000
Query: 361 atcaacgtcgaaaatgcatacattcttttgattaatacttacggaagctaaatacagatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1001 atcaacgtcgaaaatgcatacattcttttgattaatacttacggaagctaaatacagatt 1060
Query: 421 ggaatattttttagctcttaaataccaaaattaccacttcttatgtcttcgtataacttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1061 ggaatattttttagctcttaaataccaaaattaccacttcttatgtcttcgtataacttc 1120
Query: 481 ttcctattcgtttgtttatccatattgccactatgtagcttatttgtcaccggtccttga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1121 ttcctattcgtttgtttatccatattgccactatgtagcttatttgtcaccggtccttga 1180
Query: 541 ggtataaatcctggctggggtggaactggggactgatgctgattgtacctaccgccgttg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1181 ggtataaatcctggctggggtggaactggggactgatgctgattgtacctaccgccgttg 1240
Query: 601 acagggggacgaaattgttgcggctgcataggcggtggtggtgaagagtaagtctgtggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1241 acagggggacgaaattgttgcggctgcataggcggtggtggtgaagagtaagtctgtggt 1300
Query: 661 ggtggaactgccgaacttggggcatatcgttgaggtccatatcccacaccatactgagga 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1301 ggtggaactgccgaacttggggcatatcgttgaggtccatatcccacaccatactgagga 1360
Query: 721 ttaacagtaccttgtaacataccattaggcggtccccgtacaggaaccttgccttgtggc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 ttaacagtaccttgtaacataccattaggcggtccccgtacaggaaccttgccttgtggc 1420
Query: 781 atatgttgatgcataccataggatgtaccttgaggaatatgtgcatttggtcccgggtgc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 atatgttgatgcataccataggatgtaccttgaggaatatgtgcatttggtcccgggtgc 1480
Query: 841 atggttcccgggtgcatggttctcgcatcataatctggagacacttgtcttggtgctcca 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1481 atggttcccgggtgcatggttctcgcatcataatctggagacacttgtcttggtgctcca 1540
Query: 901 tgttgacgagaatataagtttggttgagctaaatgtcttggtattcttccc 951
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1541 tgttgacgagaatataagtttggttgagctaaatgtcttggtattcttccc 1591
>3x_Contig1557
Length = 10562
Score = 155 bits (78), Expect = 2e-37
Identities = 81/82 (98%)
Strand = Plus / Plus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2541 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 2600
Query: 276 ccccgtatcggagtattatttt 297
||||||||||||||||| ||||
Sbjct: 2601 ccccgtatcggagtattttttt 2622
>3x_Contig1518
Length = 11021
Score = 153 bits (77), Expect = 7e-37
Identities = 77/77 (100%)
Strand = Plus / Minus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5818 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 5759
Query: 276 ccccgtatcggagtatt 292
|||||||||||||||||
Sbjct: 5758 ccccgtatcggagtatt 5742
>3x_Contig1428
Length = 9146
Score = 151 bits (76), Expect = 3e-36
Identities = 76/76 (100%)
Strand = Plus / Minus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6455 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 6396
Query: 276 ccccgtatcggagtat 291
||||||||||||||||
Sbjct: 6395 ccccgtatcggagtat 6380
>3x_Contig1446
Length = 10598
Score = 149 bits (75), Expect = 1e-35
Identities = 81/83 (97%)
Strand = Plus / Minus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3305 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 3246
Query: 276 ccccgtatcggagtattattttt 298
|||||||||||||| || |||||
Sbjct: 3245 ccccgtatcggagtgtttttttt 3223
>3x_Contig1374
Length = 8985
Score = 149 bits (75), Expect = 1e-35
Identities = 81/83 (97%)
Strand = Plus / Minus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8891 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 8832
Query: 276 ccccgtatcggagtattattttt 298
|||||||||||||| || |||||
Sbjct: 8831 ccccgtatcggagttttcttttt 8809
>3x_Contig1521
Length = 8057
Score = 145 bits (73), Expect = 2e-34
Identities = 73/73 (100%)
Strand = Plus / Minus
Query: 217 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4296 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 4237
Query: 277 cccgtatcggagt 289
|||||||||||||
Sbjct: 4236 cccgtatcggagt 4224
>3x_Contig1741
Length = 21706
Score = 113 bits (57), Expect = 6e-25
Identities = 69/73 (94%)
Strand = Plus / Minus
Query: 216 atccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgact 275
||||||||||||||||||||||||||| |||||| |||||||||||||| ||||||||||
Sbjct: 9345 atccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgact 9286
Query: 276 ccccgtatcggag 288
||| |||||||||
Sbjct: 9285 cccggtatcggag 9273
>3x_Contig1272
Length = 8315
Score = 111 bits (56), Expect = 2e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 217 tccgatatagtgtaacggctatcacatcacgctttcaccgtggagaccggggttcgactc 276
|||||||||||||||||||||||||| |||||| |||||||||||||| |||||||||||
Sbjct: 5215 tccgatatagtgtaacggctatcacaccacgctctcaccgtggagacccgggttcgactc 5156
Query: 277 cccgtatcggag 288
|| |||||||||
Sbjct: 5155 ccggtatcggag 5144
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5810
Number of Sequences: 1807
Number of extensions: 5810
Number of successful extensions: 56
Number of sequences better than 1.0e-20: 9
length of query: 955
length of database: 10,358,551
effective HSP length: 16
effective length of query: 939
effective length of database: 10,329,639
effective search space: 9699531021
effective search space used: 9699531021
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)